How a Kenyan consignment is exported: KEPHIS, AFA, the pack house and JKIA, in order
Most guides to importing Kenyan flowers begin at the destination airport. Everything that decides whether the consignment clears there has already happened in Kenya, in a sequence with a regulator at each step. This page sets out that sequence — who licenses the exporter, who inspects the crop and when, what is checked at the airport, what the certificate costs — from the Kenyan instruments and the authority's own descriptions, and says at each step what a buyer can verify.
The order matters, and it starts at the destination
KEPHIS certifies against the importing country's rules. The exporter must first establish what the destination requires — which pests it regulates, which additional declaration it wants on the certificate, whether it requires a treatment — and only then work backwards to the farm. Compliance cannot be retrofitted to a consignment. If the destination's requirement needed an inspection while the crop was in the ground, the pack house cannot create it afterwards. What KEPHIS attests, and the sequence that decides whether you can be supplied at all →
1. The exporter's standing credentials
The Agriculture and Food Authority, through its Horticultural Crops Directorate, licenses the export of horticultural produce. Under the Crops (Horticultural Crops) Regulations the export licence fee is KES 10,000 a year and pack house registration is KES 5,000 a year — annual standing credentials, not per-consignment paperwork, applied for and renewed through the Authority's IMIS portal. The same Regulations apply an export levy of 0.25% of customs value per consignment on horticultural crops destined for export.
What a buyer can verify: the licence number, the licence year and its expiry, and the pack house registration if the same company packs. There is no public register on which to check them, so they are documents you request and read, not facts you can confirm from outside. How to verify a Kenyan supplier, step by step →
2. The growing-period inspection
KEPHIS runs farm export certification from regional offices near the growing areas — Naivasha, Nakuru, Embu and Kisumu. That is the growing-period inspection: the crop is inspected against the destination's requirements while it is in the field, and the certificate that follows attests to that. For a destination with a pest requirement — Great Britain and the European Union on the false codling moth, Australia on devitalisation — this is the step on which the certificate depends. Naivasha, where one of those offices sits →
What a buyer can verify: not the inspection itself, but the question that reveals whether it happened — was the crop inspected against this destination's requirement, and when? A supplier who understands the difference answers immediately. One who does not offers to obtain a certificate.
3. Harvest, grading and the pack house
Grading is where a Kenyan regulatory term and a trade term are most often confused. KEPHIS checks at the exit point that a consignment is properly graded — size, colour, shape — and publishes no grade scale with named tiers. So "properly graded" is a regulated inspection criterion with an indicative definition, and "Grade A" or "A1" is whatever the seller means by it, or a Dutch auction convention. What the rose specification actually consists of →
The pack house is where the box is built, and the box is the unit a quotation is built from — stems per bunch, bunches per box, boxes per pallet, and the chargeable weight that follows. Why a quotation starts with a box →
4. The exit point: JKIA, and eight standards
KEPHIS operates import and export controls, grading and inspection at Jomo Kenyatta International Airport, at Mombasa and Eldoret airports, at Mombasa port and at border points. At exit it states that it checks eight standards: freedom from pests and pest damage; freedom from diseases and disease damage; maximum residue level compliance; no physiological disorders; properly graded; no excessive moisture; whole, with no mechanical damage; and packaging that is clearly labelled, clean and well ventilated. Inspection intensity is not uniform — visual, microscopic or both, depending on the assessed risk of the commodity.
What a buyer can verify: nothing at the airport, and everything on the certificate — because the certificate is the record of this step.
5. The certificate, and what it costs
The phytosanitary certificate for fresh produce is KES 500, under the Plant Protection (Fees and Charges) Rules. Fresh-produce inspection is charged at 50 cents per kilogram, with a minimum of KES 100, plus KES 500 per certificate; inspection at the Nairobi exit point is KES 1,000; and agricultural export products carry a charge of KES 5,000 per consignment declared for export. These are gazetted statutory fees, cross-checked against a High Court judgment that quotes them independently — and they are the floor, not the cost of exporting. The fee schedule in full, and why a circulated PDF of it gives wrong figures →
The certificate can travel electronically. Under the IPPC's ePhyto exchange a certificate moves from the exporting country's plant protection organisation to the importing country's through a central hub, and that authentication is the legal equivalent of the officer's signature and seal. Ask whether the consignment will move on ePhyto, and tell your own plant health authority to expect it.
What it costs at origin, listed once
| Item | Charge | Instrument |
|---|---|---|
| Export licence | KES 10,000 a year | Crops (Horticultural Crops) Regulations |
| Pack house registration | KES 5,000 a year | Crops (Horticultural Crops) Regulations |
| Export levy | 0.25% of customs value, per consignment | Crops (Horticultural Crops) Regulations |
| Phytosanitary certificate, fresh produce | KES 500 | Plant Protection (Fees and Charges) Rules |
| Fresh-produce inspection | 50 cents per kg, minimum KES 100, plus KES 500 per certificate | Plant Protection (Fees and Charges) Rules |
| Inspection at the Nairobi exit point | KES 1,000 | Plant Protection (Fees and Charges) Rules |
| Agricultural export products, per consignment declared | KES 5,000 | Plant Protection (Fees and Charges) Rules |
Kenyan statutory charges as read from Kenya Law's consolidated texts. None of this is freight, handling, clearance or the destination's charges. What the destination borders charge, and how differently each behaves →
What happens next is the destination's
From the moment the aircraft leaves, the sequence belongs to the importing country: Great Britain wants notice on IPAFFS of at least four working hours before an air consignment lands and a certificate issued inside its 13-day window; the Netherlands checks the additional declarations before it opens anything; Australia checks the treatment statement against BICON. The certificate rules at the British border → What actually stops Kenyan consignments, ranked →
What to ask, in the order the process runs
- Which destination requirements was the crop inspected against, and when?
- What is the AFA export licence number, year and expiry, and the pack house registration?
- Who issues the certificate, will it move on ePhyto, and which additional declaration will it carry?
- How is the box built — stems per bunch, bunches per box — because that, not the stem, is what the quotation prices.
Ready to specify a requirement?
If you can state the product, stem length, head size, quantity, frequency and destination, we can give you a useful answer. If you cannot yet, say so on the form — every technical field has an “I don’t know yet, please advise” option.
Last verified 26 September 2026
Sources
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KEPHIS — Phytosanitary Services
What we read
Certification against the importing country's requirements; farm export certification from the Embu, Kisumu, Naivasha and Nakuru offices; import and export controls, grading and inspection at Jomo Kenyatta, Mombasa and Eldoret airports, Mombasa port and border points; the eight exit-point standards; inspection intensity by assessed commodity risk.
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Kenya Law — Plant Protection (Fees and Charges) Rules, L.N. 48/2009, Schedule Part B
What we read
Consolidated text as at 31 December 2022. Phytosanitary certificate for fresh produce KES 500; fresh-produce inspection 50 cents per kilogram, minimum KES 100, plus KES 500 per certificate; inspection at ports of entry or exit (Nairobi) KES 1,000; agricultural export products KES 5,000 per consignment declared for export. Cross-checked against Shaz Ventures Limited and 3 others v KEPHIS, [2025] KEHC 19285 (KLR).
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Kenya Law — The Crops (Horticultural Crops) Regulations, L.N. 118/2020, Third Schedule and Regulation 33(1)
What we read
Export levy at 0.25 per cent of customs value per consignment on horticultural crops destined for export; export licence KES 10,000 a year; pack house registration KES 5,000 a year.
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Agriculture and Food Authority — Horticultural Crops Directorate service hub and AFA IMIS portal
What we read
The Authority as licensing body for horticultural exports; IMIS as the portal through which licences are obtained and renewed. No public register of licence holders was located.
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IPPC — ePhyto Solution
What we read
Electronic phytosanitary certificates exchanged authority to authority through a central hub, with the issuing authority's authentication as the legal equivalent of signature and seal.
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GOV.UK — Import plants and plant products from non-EU countries to Great Britain
What we read
Cited for the destination-side step only - notice on IPAFFS of at least four working hours for air freight and the 13-day certificate window.